Search results for "calcium carbonate"

showing 10 items of 175 documents

In situ carbon and oxygen isotopes measurements in carbonates by fiber coupled laser diode-induced calcination: A step towards field isotopic charact…

2021

International audience; Natural stable isotopes ratios (δ13Ccarb and δ18Ocarb) of carbonates archived in the geological record are routinely used to reconstruct local and global paleo temperatures and the secular evolution of the biogeochemical carbon cycle. The state-of-the-art technique, employed since the mid 20th century, to measure these isotopic ratios starts with field sampling followed by several steps of physical and chemical laboratory preparation including: (i) microdrilling and/or sawing and crushing, (ii) CO2 release by wet acid digestion, (iii) gas equilibration, purification and transfer, before (iv) gas phase IRMS measurements. While these steps are time and resource consumi…

010504 meteorology & atmospheric sciencesδ18OCarbonate mineralsAnalytical chemistryCarbonateschemistry.chemical_elementLaser010502 geochemistry & geophysics01 natural scienceslaw.inventionchemistry.chemical_compoundSideriteGeochemistry and Petrologylaw[SDU.STU.GC]Sciences of the Universe [physics]/Earth Sciences/GeochemistryCalcination0105 earth and related environmental sciencesCarbon isotopesGeologyCarbon cycleCalcium carbonatechemistry13. Climate actionCarbon dioxideOxygen isotopesCarbonateCarbonGeology
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Biochemical characterization of the skeletal matrix of the massive coral, Porites australiensis - The saccharide moieties and their localization.

2018

11 pages; International audience; To construct calcium carbonate skeletons of sophisticated architecture, scleractinian corals secrete an extracellular skeletal organic matrix (SOM) from aboral ectodermal cells. The SOM, which is composed of proteins, saccharides, and lipids, performs functions critical for skeleton formation. Even though polysaccharides constitute the major component of the SOM, its contribution to coral skeleton formation is poorly understood. To this end, we analyzed the SOM of the massive colonial coral, Porites australiensis, the skeleton of which has drawn great research interest because it records environmental conditions throughout the life of the colony. The coral …

0106 biological sciences0301 basic medicineBiomineralizationGlycanCoralMatrix (biology)Polysaccharide010603 evolutionary biology01 natural sciencesCalcium Carbonate03 medical and health sciencesCalcification PhysiologicSaccharideStructural BiologyMonosaccharideAnimals14. Life underwater[SDV.IB.BIO]Life Sciences [q-bio]/Bioengineering/BiomaterialsSkeletonchemistry.chemical_classificationbiologySkeletal organic matrixLectinProteinsAnthozoaSkeleton (computer programming)Porites australiensisExtracellular Matrix030104 developmental biologyBiochemistrychemistrybiology.proteinMicroscopy Electron ScanningCoralCrystallizationBiomineralization
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Acidic shell proteins of the Mediterranean fan mussel Pinna nobilis.

2011

43 pages; In molluscs, the shell secretion process is controlled by a set of extracellular macromolecules collectively called the shell matrix. The shell matrix, which is produced by the mantle epithelial cells during mineralization, is predominantly composed of proteins, glycoproteins, acidic polysaccharides, and chitin that precisely regulate the deposition of calcium carbonate outside the mantle cells. In the present paper, we focus on the shell of Pinna nobilis, the giant Mediterranean fan mussel, usually considered as a model for studying molluscan biomineralization processes. P. nobilis exhibits indeed a nacro-prismatic shell, the outer layer of which is constituted of the so-called "…

0106 biological sciences0303 health sciencesbiology010604 marine biology & hydrobiologyMusselAnatomybiology.organism_classification[ SDV.IB.BIO ] Life Sciences [q-bio]/Bioengineering/Biomaterials01 natural sciencesMineralization (biology)03 medical and health scienceschemistry.chemical_compoundCalcium carbonatechemistryChitinBiophysics14. Life underwaterMantle (mollusc)[SDV.IB.BIO]Life Sciences [q-bio]/Bioengineering/Biomaterials030304 developmental biologyPinna nobilisMacromoleculeBiomineralization
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Mineral phase in shell repair of Manila clam Venerupis philippinarum affected by brown ring disease.

2011

14 pages; International audience; The mineral phase of shell repair in the Manila clam Venerupis philippinarum affected by brown ring disease (BRD) was characterised at various scales and at various stages of shell repair by confocal Raman microspectrometry and scanning electron microscopy. Spherulitic and quadrangular aragonite microstructures associated with polyene pigments were clearly observed. Von Kossa staining showed that at the beginning of shell repair, hemocytes are filled with insoluble calcium carbonate salts in all fluids and then are transported toward the extrapallial fluids and the repair sites. Our analyses suggest that after a Vibrio tapetis attack and BRD deposit some cl…

0106 biological sciencesBiomineralizationHemocytesMineralogyAquatic Scienceengineering.materialSpectrum Analysis Raman010603 evolutionary biology01 natural sciences03 medical and health scienceschemistry.chemical_compoundRaman microspectrometryVenerupis philippinarumAnimalsVon Kossa stain[SDV.IB.BIO]Life Sciences [q-bio]/Bioengineering/BiomaterialsMolluscaEcology Evolution Behavior and Systematics030304 developmental biologyVibrio0303 health sciencesbiologyAragoniteBivalviabiology.organism_classification[ SDV.IB.BIO ] Life Sciences [q-bio]/Bioengineering/BiomaterialsShell microstructureBivalviaCalcium carbonateAragonitechemistry[SDU]Sciences of the Universe [physics]engineeringBiophysicsCarbonateMolluscCalcium carbonateScanning electron microscopyBiomineralizationDiseases of aquatic organisms
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The shell matrix of the pulmonate land snail Helix aspersa maxima.

2012

12 pages; International audience; In mollusks, the shell mineralization process is controlled by an array of proteins, glycoproteins and polysaccharides that collectively constitute the shell matrix. In spite of numerous researches, the shell protein content of a limited number of model species has been investigated. This paper presents biochemical data on the common edible land snail Helix aspersa maxima, a model organism for ecotoxicological purposes, which has however been poorly investigated from a biomineralization viewpoint. The shell matrix of this species was extracted and analyzed biochemically for functional in vitro inhibition assay, for amino acid and monosaccharides composition…

0106 biological sciencesBiomineralizationPulmonate snailPhysiology01 natural sciencesBiochemistryMineralization (biology)chemistry.chemical_compoundX-Ray DiffractionTandem Mass SpectrometryElectrophoresis Gel Two-DimensionalHaliotisAmino AcidsComputingMilieux_MISCELLANEOUSchemistry.chemical_classification0303 health sciencesEcologyMonosaccharidesLand snailImmunogold labellingImmunohistochemistryAmino acidBiochemistryElectrophoresis Polyacrylamide GelTerrestrial snail ; biomineralization ; shell ; aragonite ; crossed-lamellar ; protein ; immunogold ; gel electrophoresisFrancefood.ingredientBiology010603 evolutionary biologyCalcium Carbonate03 medical and health sciencesfoodSpecies SpecificityAnimal ShellsShellAnimals14. Life underwater[SDV.IB.BIO]Life Sciences [q-bio]/Bioengineering/BiomaterialsMolecular Biology030304 developmental biologyHelix SnailsProteinsCrossed-lamellarbiology.organism_classification[ SDV.IB.BIO ] Life Sciences [q-bio]/Bioengineering/BiomaterialsGel electrophoresis[SDV.BA.ZI]Life Sciences [q-bio]/Animal biology/Invertebrate ZoologyCalcium carbonatechemistryMicroscopy Electron ScanningBiomineralizationPinctadaComparative biochemistry and physiology. Part B, Biochemistrymolecular biology
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Shell repair process in the green ormer Haliotis tuberculata: a histological and microstructural study.

2008

In the present paper, juvenile and adult shells of the green ormer Haliotis tuberculata ('Oreille de Saint-Pierre') were perforated in a zone close to the shell edge and the shell repair process was followed at two levels: (1) by observing the histology of the calcifying mantle in the repair zone and (2) by analyzing with SEM the microstructure of the shell repair zone. Histological data clearly show the presence of calcium carbonate granules into the connective tissues, but not in the epithelial cells. This suggests that calcium carbonate granules are synthesized by sub-epithelial cells and actively transported through the epithelium to the repair zone, via a process which may be similar t…

0106 biological sciencesBiomineralizationfood.ingredient010603 evolutionary biology01 natural sciencesMineralization (biology)Epithelium03 medical and health scienceschemistry.chemical_compoundfoodMantle epitheliumGreen ormerAnimalsShell repair14. Life underwaterHaliotisPinctadaMantle (mollusc)[SDV.IB.BIO]Life Sciences [q-bio]/Bioengineering/BiomaterialsGastropodMicrostructureComputingMilieux_MISCELLANEOUS030304 developmental biology0303 health sciencesWound HealingbiologyCell BiologyGeneral MedicineAnatomybiology.organism_classification[ SDV.IB.BIO ] Life Sciences [q-bio]/Bioengineering/Biomaterials[SDV.BA.ZI]Life Sciences [q-bio]/Animal biology/Invertebrate ZoologyKineticsCalcium carbonatechemistryBiophysicsMicroscopy Electron ScanningEastern oysterCalcium carbonateDevelopmental BiologyPinctadaBiomineralization
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Seguimiento del fenómeno blanco de la laguna de la Cruz (Cuenca, España)

2020

[EN] In the present study, a five-year follow-up was performed by remote sensing of the calcium carbonate precipitation in La Gitana karstic lake also known as La Cruz (located on the province of Cuenca, Spain). The important role that calcium carbonate precipitation plays in the ecology of the lake is well known for its influence on the vertical migrations of phytoplankton, the concentration of bioavailable phosphorus and, therefore, the eutrophication and quality of the waters. Whiting take place between the months of July and August, and it can be studied at this time through its optical properties, with the main objective of offering updated data on a phenomenon traditionally studied an…

0106 biological sciencesCarbonato cálcico010504 meteorology & atmospheric sciencesGeography Planning and Developmentchemistry.chemical_elementlcsh:G1-922KarstPrecipitation01 natural sciencesPrecipitaciónPhytoplanktonEarth and Planetary Sciences (miscellaneous)TeledetecciónWhitingCalcium carbonate precipitation0105 earth and related environmental sciencesFenómeno blancoAbiotic componentgeographygeography.geographical_feature_categorybiology010604 marine biology & hydrobiologyPhosphorusRemote sensingAtmospheric temperaturebiology.organism_classificationKarstWhitingOceanographychemistryEnvironmental scienceEutrophicationCalcium carbonatelcsh:Geography (General)
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The skeletal proteome of the coral Acropora millepora: the evolution of calcification by co-option and domain shuffling.

2013

14 pages; International audience; In corals, biocalcification is a major function that may be drastically affected by ocean acidification (OA). Scleractinian corals grow by building up aragonitic exoskeletons that provide support and protection for soft tissues. Although this process has been extensively studied, the molecular basis of biocalcification is poorly understood. Notably lacking is a comprehensive catalog of the skeleton-occluded proteins-the skeletal organic matrix proteins (SOMPs) that are thought to regulate the mineral deposition. Using a combination of proteomics and transcriptomics, we report the first survey of such proteins in the staghorn coral Acropora millepora. The or…

0106 biological sciencesProteomeCoralMolecular Sequence Datacalcium carbonate skeletonProteomics010603 evolutionary biology01 natural sciencesMass SpectrometryCalcium CarbonateEvolution Molecular03 medical and health sciencesAcropora milleporaCalcification PhysiologicproteomicsPhylogeneticsAnthozoa[SDV.BBM.GTP]Life Sciences [q-bio]/Biochemistry Molecular Biology/Genomics [q-bio.GN]evolutionGeneticsAnimals14. Life underwaterAmino Acid Sequencescleractinian[SDV.IB.BIO]Life Sciences [q-bio]/Bioengineering/BiomaterialsMolecular BiologyEcology Evolution Behavior and SystematicsDiscoveriesPhylogeny030304 developmental biologyStaghorn coral0303 health sciencesbiologySequence Homology Amino AcidEcologyMolecular Sequence Annotationbiology.organism_classification[ SDV.IB.BIO ] Life Sciences [q-bio]/Bioengineering/BiomaterialsAnthozoabiomineralizationExtracellular MatrixProtein Structure TertiaryEvolutionary biology[ SDV.BBM.GTP ] Life Sciences [q-bio]/Biochemistry Molecular Biology/Genomics [q-bio.GN]ProteomeSequence AlignmentFunction (biology)
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Seaweed fails to prevent ocean acidification impact on foraminifera along a shallow-water CO2 gradient

2014

Ocean acidification causes biodiversity loss, alters ecosystems, and may impact food security, as shells of small organisms dissolve easily in corrosive waters. There is a suggestion that photosynthetic organisms could mitigate ocean acidification on a local scale, through seagrass protection or seaweed cultivation, as net ecosystem organic production raises the saturation state of calcium carbonate making seawater less corrosive. Here, we used a natural gradient in calcium carbonate saturation, caused by shallow-water CO2 seeps in the Mediterranean Sea, to assess whether seaweed that is resistant to acidification (Padina pavonica) could prevent adverse effects of acidification on epiphytic…

0106 biological sciencesSettore BIO/07 - Ecologia010504 meteorology & atmospheric sciencesPadina pavonica01 natural sciencesForaminiferaBlue carbonchemistry.chemical_compoundEcosystem14. Life underwaterEcology Evolution Behavior and SystematicsOriginal Research0105 earth and related environmental sciencesNature and Landscape ConservationBlue carbonbiologyEcologyEcologyShallow-water CO<inf>2</inf> seep010604 marine biology & hydrobiologyOcean acidificationBenthic foraminiferaCoastal communitieshallow-water CO2 seepsOcean acidification15. Life on landbiology.organism_classificationcoastal communitiesEcology Evolution Behavior and SystematicSeagrassCalcium carbonatechemistry13. Climate actionCalcareous
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Geochemical survey of Levante Bay, Vulcano Island (Italy), a natural laboratory for the study of ocean acidification

2013

Abstract Shallow submarine gas vents in Levante Bay, Vulcano Island (Italy), emit around 3.6t CO2 per day providing a natural laboratory for the study of biogeochemical processes related to seabed CO2 leaks and ocean acidification. The main physico-chemical parameters (T, pH and Eh) were measured at more than 70 stations with 40 seawater samples were collected for chemical analyses. The main gas vent area had high concentrations of dissolved hydrothermal gases, low pH and negative redox values all of which returned to normal seawater values at distances of about 400 m from the main vents. Much of the bay around the vents is corrosive to calcium carbonate; the north shore has a gradient in s…

0106 biological sciencesSettore BIO/07 - EcologiaBiogeochemical cycle010504 meteorology & atmospheric sciencesCarbonatesAquatic ScienceOceanography01 natural sciencesCalcium CarbonateMarine geochemistrychemistry.chemical_compoundCarbon capture and storageSeawater14. Life underwaterSeabed0105 earth and related environmental sciences010604 marine biology & hydrobiologyCarbonate saturation stateOcean acidificationOcean acidificationCarbon DioxidePollutionSettore GEO/08 - Geochimica E VulcanologiaVolcanic ventsOceanographyCalcium carbonatechemistryBaysItaly13. Climate actionCarbon dioxideCarbonateSeawaterBayGeologyWater Pollutants ChemicalEnvironmental MonitoringMarine Pollution Bulletin
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